| Label | Marker |
|---|
| Adipoce stem and progenitor cells | Bmper, C7, Fbn1, Col6a5, Gas7, Slit3, Tnfaip6, Adamts12, Ebf2, Vit |
| Adipocytes | Ghr, Tenm4, Acaca, Me1, Slc27a1, Fam13a, Acacb, Art3, Nrg4, Gm4876 |
| Alox15 positive cells | Alox15, Padi4, Tgfb2, Gm13986, Wnt2, Laptm5, Slpi, 4930455G09Rik, Gm4035, Gm29397 |
| Ascending thin limb of LOH cells | 4930407G08Rik, Tbpl2, Nr2e3, Slco4a1, Uncx, 1700016C15Rik, Angpt2, Wnt8b, D630014O11Rik, C330013F16Rik |
| Asic2 positive cells | Gm4804, Cpxm2, Sfrp5, Gm15404, Gjb2, Mfap5, Sept6, Fxyd6, Gm6614, Cldn1 |
| Astrocytes | Slc1a2, Gfap, Slc6a11, Grm3, Arhgef4, Slco1c1, Gm13325, Myoc, Ntsr2, Gm13322 |
| Atrial cardiomyocytes | Nppa, Bmp10, Fgf12, Pam, Kcnj3, Ankrd1, Gm12381, Dkk3, Epha4, Myl4 |
| Basal cells | Msln, Ces1h, Tiam1, Ccl20, Ifitm10, Calcoco1, Plekhg1, Fmo6, Tbx1, Ces2f |
| Bergmann glia | Luzp2, A2m, Actbl2, Gm5089, Nwd1, Gareml, Gm3764, Gm29521, Msx2, RP23-340C13.4 |
| Brown adipocytes | Gmpr, Kcnk3, Adra1a, Xrcc6, Col27a1, Dio2, Gm11769, Slc36a2, Gm10032, Ucp1 |
| Cacna1b positive cells | Ngf, Gstp2, Ccbl1, Mug2, Lcn2, Serpina1b, Gpc3, 2310034O05Rik, Cyp2a5, 1700084C01Rik |
| Cerebellum granule neurons | Copg2, Nefm, Nefh, Nefl, Gabra6, Cbln3, Cbln1, Barhl2, Gm12116, Zic2 |
| Cerebellum interneurons | Skor1, Bhlhe22, Ssxb5, Prdm8, Gm12198, Ccdc27, Trim67, Gm27199, Gm14204, Slc32a1 |
| Chief cells | Gm12298, D930019O06Rik, Amy2a1, 4930509E16Rik, Mettl21b, CH25-241D1.1, Gm11963, Gm13420, Arntl2, Gm15889 |
| Cholangiocytes | Tfpi2, E130309D02Rik, Gm830, Bend5, 1810008I18Rik, Slc45a3, Fam198a, 4930486I03Rik, Urah, Setd1a |
| Choroid plexus epithelial cells | Enpp2, Htr2c, Trpm3, Ttr, Wdr17, Slc4a10, Gmnc, Otx2os1, Cngb3, Otx2 |
| Ciliated cells | Scgb1a1, Sec14l3, Cdc20b, Cyp2f2, Lrrc23, Pbx1, Dnah6, Cbr2, Cep128, E030010N08Rik |
| Circulating hepatoblasts | Cp, Cyp7b1, Egfr, Pzp, Cps1, Trf, Adk, Pid1, Cfh, Slc7a2 |
| Colec10 positive cells | Nr1h5, Adamts13, Colec10, Gdf2, Lhx2, Colec11, Rbp1, Gm6277, RP23-331M15.1, Gm16113 |
| Colonic epithelial cells | Slc26a2, Tgm3, Car4, Saa1, Parm1, Ly6g, Bmp2, Fth1, Slc26a3, Ly6a |
| Connecting tubule cells | Tfcp2l1, Klk1, Npnt, Pkhd1, Aqp2, Cdkl1, Aqp3, Veph1, Myh10, Col4a4 |
| Cortical projection neurons 1 | Dcc, Il1rapl1, Npsr1, Ntrk2, E530001K10Rik, Cacna2d3, Gpc5, Gm27247, Lrp1b, Rasgrf1 |
| Cortical projection neurons 2 | Grm4, Thsd7b, Gm15338, Kcnip3, Dpp10, 3110035E14Rik, Sdk2, Olfr114, Sema5b, Srcin1 |
| Cortical projection neurons 3 | Zfp804b, Olfm3, Kctd16, Ntng2, Stk32c, Tmem178, Slc24a2, 1700023F02Rik, Bdnf, 6530402F18Rik |
| Dentate gyrus neurons | Rgs7, Sorcs3, Brinp1, Galnt14, Dlgap2, Baiap2, Bai1, Mapk4, Homer1, Lrfn5 |
| Descending thin limb of LOH cells | Park2, Slc4a11, Fst, Tbpl2, Bdh2, 4930407G08Rik, Lypd2, Trim60, Car14, RP24-393L8.1 |
| Distal convoluted tubule cells | Slc12a3, Wnk1, Abca13, Defb1, Klhl3, Sfrp1, Clcnkb, Ppp1r1a, Kctd1, Tsc22d1 |
| Endocardial endothelial cells | Inhba, Rps6ka2, Sncaip, Emcn, Vcam1, Adh6b, Igf2, Rdx, Nos3, Slc26a10 |
| Endothelial cells | Atp13a5, Gm5127, Fbln5, Zic3, Ltbp4, RP24-287C2.1, Gm12868, Zic2, Nos3, Itm2a |
| Enteric glia | Rasgef1c, Gpr37l1, Tmprss5, Gm14267, Gm12688, Kank4, Adam11, Cmtm5, Lgi4, Kcna1 |
| Enteric neurons | Fam155a, Fgf13, Cntnap2, Asic2, Kcnb2, Pcdh9, Sgcz, Lingo2, Kcnd2, Zfp804a |
| Enteroendocrine cells | Chgb, Nts, Gip, Chga, Mctp2, Asic5, Tph1, Pappa2, Rfx6, Gcg |
| Ependymal cells | Sspo, Tas2r113, RP24-400J22.2, Gm10714, 4930519F16Rik, RP23-300L15.1, Olfr1512, Vmn2r44, Olfr1511, RP24-461L18.2 |
| Epididymal cells | Akr1b7, Crisp1, Wdr25, 5430419D17Rik, Pax2, Rgs6, Plcb1, 1700112E06Rik, Fam129a, Ptgs2 |
| Erythroblasts | Slc25a21, Specc1, Zdhhc14, Sptb, Prim2, Bcl11a, Ank1, Rhag, Hbb-bs, Pvt1 |
| Fcgbp positive cells | Trps1, Ptn, Stc2, Wnt5b, Cyp3a57, Fbn2, Sema4c, BC006965, Btn1a1, Mlph |
| Fibroblasts | Dmbt1, Cyp2c55, Car1, Col6a1, Slc37a2, Col6a2, Col6a4, Htr4, Col6a3, Col4a1 |
| Fibro–adipogenic progenitors | Prg4, Zfp385b, Scara3, Fndc1, Scara5, Nova1, Abca8a, Smoc2, Medag, Snrpa1 |
| Fut9 positive cells | Meg3, Tenm2, Lsamp, Fgf14, Ank2, Syt1, Tmem132d, Unc5c, Elavl2, Pde4b |
| Gastric epithelial cells | Ank, Cemip, Gm94, Lipm, Aim1, Aadacl3, Aox4, Skint6, Tmprss11f, Pla2g4e |
| Gastric mucous cells | Rptn, RP23-227A12.3, Krt78, Gm15318, A4gnt, Prima1, Teddm3, Sfta2, Sox21, Cxcl17 |
| Goblet cells | Fgfr2, Tmem56, Lct, Abcc2, Jarid2, Cyp3a25, Mme, Dab1, Gm22179, Klhl32 |
| Habenula neurons | Nwd2, Kcnma1, Kctd8, Cdh10, Gm29478, Robo3, Olfr723, Gabbr2, Gpr139, Lrrc55 |
| Hepatic stellate cells | Serpina1e, Apoe, Serpina3k, Apoc1, Aox3, Fgb, Mup3, Apoa2, Gc, Hpx |
| Hepatocytes | Zfp395, Serpind1, Mup2, Gm20319, Gm29475, 1110008F13Rik, Mvd, Gm3839, Ikbkg, Ftcd |
| Hindbrain neurons 1 | Lgi2, Vmn2r-ps9, Gm20058, Grm2, Gm14204, Scrg1, Vmn2r5, Gm20657, Gm26939, 1700109G14Rik |
| Hindbrain neurons 2 | Vwc2l, Cdh23, Zmat4, Adamts2, Gm15645, Bcan, Cpne9, Il1rapl2, Crhr1, Lzts1 |
| Inferior olivary nucleus neurons | Nrcam, Foxp2, Nell2, 2600014E21Rik, Rims4, Gm5974, Htr5b, Haglr, Gm23326, Gm15393 |
| Interbrain and midbrain neurons 1 | Lrrc7, Gabra4, Adarb1, Abhd12b, Tspear, Lrrn2, Kcnj9, Lhx9, Hrh3, Grin2b |
| Interbrain and midbrain neurons 2 | Rora, Dok5, Grik2, Tph2, Calcr, Gabra5, Miat, Sorcs1, Fam135b, Zim1 |
| Interneurons 1 | Grip1, Gria1, Galntl6, Cntnap4, Nxph1, Cntnap5c, Pou6f2, Trhde, Lrrc4, Crhbp |
| Interneurons 2 | Adarb2, Npas3, Dync1i1, Dlx6os1, Cplx2, Cntn4, Sobp, Nkain3, Neto1, 4930555F03Rik |
| Interstitial cells of Cajal | Barx1, Spry4, Gm4131, Rem1, Armcx2, RP23-53H1.3, Fibin, Tnn, Gpr173, Dact3 |
| Intestinal epithelial cells | Pcsk5, Clec2h, 2900026A02Rik, Malrd1, Epcam, Enpep, Myo1d, Mep1b, Cdhr2, Ace2, Krt20, Slc15a1, Ezr, Slc43a2, Xdh, Fabp2, AI747448, Magi1, Abcb1a, Nckap5, Gmds, Cubn, Rrbp1, Reg3b, Sepp1, Plb1, Enpp3, Clca6, Rnf213, Ddx60, mt-Co1, Ext1, Clca3, Atp2b1, Ahnak |
| Juxtaglomerular cells | Ren1, Ndst3, Cep112, Nkx3-1, Alx1, 1700066O22Rik, Gm16340, Hey2, Pcdh18, Nrip2 |
| Lgr5 positive cells | 3110099E03Rik, Mannr, Miox, Fam181b, Cyp1a1, Ssu2, Igdcc3, Slco4a1, RP23-212H4.3, Dhh |
| Lymphatic endothelial cells | 4930435H24Rik, F8, Mmrn1, Neo1, Slc41a1, Flt4, Klhl4, Rnf220, Gm15581, Fam43a |
| Lymphoid cells | Ighm, Sox5, Klhl6, Dach2, Gm14005, Ezh2, BE692007, Arid5a, Satb1, Fam169b |
| Lymphoid cells_B cells | Cnot6l, Gm15987, Blnk, Dock10, Lipc, Bcl6, Insig2, St3gal1, Rrp1b, St8sia6 |
| Lymphoid cells_Cycling B cells | Bach2, Parp8, Rhoh, Chrna9, Map4k1, Nuggc, Il21r, Mybl1, Dck, Mef2b |
| Lymphoid cells_Plasma cells | Ighg2b, Ighg1, Ighv9-3, Ighg3, Ighj4, Abcc4, Gclc, Dock2, Znrf3, Ighv3-6 |
| Lymphoid cells_Resting B cells | Nlrc3, Gpr18, H2-Oa, Ccr6, Tnfrsf13c, H2-Eb2, Gm18342, Fcrl1, Cd79a, H2-Ob |
| Lymphoid cells_T cells | Themis, 5830411N06Rik, Il2ra, Crtam, Il23r, Lef1, Il7r, Cd5, Icos, Tnfsf8 |
| Macula densa cells | Slc12a1, Erbb4, Fxyd2, Enox1, Sostdc1, Sec14l1, Casr, Gm16076, Col5a2, Pamr1 |
| Megf11 positive cells | Greb1l, Akr1b3, Clcnka, Bsnd, Folr1, Gm13075, Cldn19, Sim2, Lypd2, Ugt8a |
| Mesothelial cells | Abcb1b, Caln1, Fn1, Adamtsl1, Mast4, Pkhd1l1, Kazn, Gpm6a, Has1, Upk3b |
| Mfge8 positive cells | Mfge8, Fcamr, Hpse2, Ccl21a, S1pr3, Dchs2, Edar, Cxcl13, Cr2, Stra6 |
| Microglia | RP23-247J17.2, Crybb1, RP23-247J17.3, Ifi202b, AY512915, Trem2, Gpr34, Gal3st4, Gm26680, Tmem119 |
| Mirg positive cells | Phka1, Rian, B830012L14Rik, RP23-204I16.3, Mirg, Gm14261, Asb14, Mir1a-1, Mir341, Pfkfb3 |
| Muc2-producing goblet cells | Odf2l, Saysd1, Ptgdr, RP24-441N3.3, Pdx1, Gm26801, Gm12506, Grin1os, Rap1gapos, Lrrc26 |
| Muc5ac-producing goblet cells | Cybrd1, Nqo1, 2210019I11Rik, Gm15816, Vstm2b, Gm13881, Syt8, Tcf23, Nkx6-3, 4930404N11Rik |
| Muc6-producing goblet cells | Gkn3, 2310057J18Rik, BC048546, Glp1r, Tff2, Wfdc18, Nkx6-2, Gm16120, Nkx6-3, Kctd14 |
| Mural cells | Car3, Mylk, Cald1, Flna, Lpl, Prkg1, Limch1, Macf1, Alcam, Sftpc |
| Muscle satellite cells | Pax7, Otoa, Gm26834, Megf10, Pdgfrl, Chodl, Rapsn, Myf5, Cdh15, Capn6 |
| Myelinating Schwann cells | Mpz, Tenm3, Mylk4, Sptbn5, RP23-121N19.3, Gldn, Shc4, Ogn, Ncmap, B230206H07Rik |
| Myeloid cells | Itga6, Lims1, Med12l, Timd4, Cd226, Mmp9, Chst11, Gpnmb, Mir99ahg, Gnptab |
| Myeloid cells_Alveolar macrophages | Olr1, Ncf1, Cxcl2, Fpr2, Clec7a, Cyb561a3, RP24-443M8.2, Abcg1, Clec4n, Fpr1 |
| Myeloid cells_Basophils | Rasa3, Dhx40, Hgf, Arhgap10, Il6, Nrgn, Hdc, Nbeal2, Slc6a4, Pim1 |
| Myeloid cells_Dendritic cells | Aldh1a2, Itgb8, Nr4a3, Slamf7, Col17a1, Wdfy4, Cd80, Il12b, Cd86, Cdk6 |
| Myeloid cells_Interstitial macrophages | Sirpa, Stab1, Msr1, Ccr5, Nrros, Marco, Aoah, Sdc3, Apobec1, Mrc1 |
| Myeloid cells_Mast cells | Cpa3, Mcpt1, Tpsb2, Mcpt2, Mcpt9, Olfr920, Mrgprb2, Cd200r3, Mrgprb1, Tpsab1 |
| Myeloid cells_Monocytes | Hc, Vcan, Fgr, Igsf6, Pot1b, RP23-349H13.2, Sirpb1c, Klra2, Treml4, Gpr141 |
| Myeloid cells_Neutrophils | Irg1, S100a9, Ncf2, Clec4d, Stfa2l1, R3hdm4, Trem1, A530064D06Rik, RP24-127D13.2, Retnlg |
| Myotendinous junction myonuclei | Lama2, Ptprq, Adamts20, Pdlim3, Col22a1, Sim1, Hmgb1-ps8, Gadl1, Kbtbd12, Hephl1 |
| Ncam1 positive cells | Gm8126, F3, Mir351, C430049B03Rik, Kcnh8, Gm28730, Gm7233, Hoxc4, Wnt16, G6pc2 |
| Neural cells | Dct, Soat1, Gm12068, Mgll, Slc12a2, Fgl2, Tyr, Zbtb8a, Pax3, Nlrp5-ps |
| Neuromuscular junction myonuclei | Prkar1a, Fam19a4, Psd3, Xirp2, Clcn1, Musk, Col19a1, Colq, 2610203C22Rik, Nes |
| Ngf positive cells | Angptl2, 2610028E06Rik, Thbs2, Pebp1, Mroh5, Gm20386, Fibin, Ackr4, Tcf21, Plagl1 |
| Non-myelinating Schwann cells | Spock1, Cdh19, Lrrc4c, Focad, Ptchd4, Pex5l, Cadm2, D7Ertd715e, Col28a1, Dscam |
| OB neurons 1 | Gm29260, Gm11404, Frmd7, Sp8, Dlx6os2, Sp9, 2900079G21Rik, Grm2, Npffr2, Igfbpl1 |
| OB neurons 2 | Htr1f, Sp8, Trh, Frmd7, Gad2, Sp9, Dlx1, Dlx6, Igfbpl1, Npffr2 |
| OB neurons 3 | Ptprd, Kirrel3, Car10, Reln, Grm8, Nav2, Gabrb1, Fam184a, Kcnh7, Cacnb4 |
| Oligodendrocyte progenitor cells | Gpr17, Neu4, Zfp488, Olig2, A930009A15Rik, Olig1, Rlbp1, S100a2, AI854517, B9d1os |
| Oligodendrocytes | Plp1, Mobp, Prr5l, Cdh20, Mag, Nfasc, Opalin, Ermn, Gm12324, Hapln2 |
| Osteoblasts | Csmd1, Olfr394, Gm16000, Vmn1r-ps47, Mir694, RP23-456B9.23, Cyp1b1, Vmn2r97, Gm12111, Elane |
| Pancreatic acinar cells | Cela1, Pnliprp1, Cel, Cela2a, Cpa2, Cpb1, Pnlip, Cpa1, Galnt6os, Rbpjl |
| Paneth cells | Mmp7, Lyz1, Pla2g2a, Itln1, Defa-ps7, Defa-ps4, Mptx2, Gm7861, Gm27162, Gm21498 |
| Parietal cells | Atp4a, Gm15564, Pla2g1b, Chia1, Tff1, Gkn1, Muc5ac, Gif, Dpcr1, Furin |
| Pde4c positive cells | Gm4131, Nkx3-2, Hand1, Tmem200c, RP23-373D16.3, Pde4c, Slc27a6, RP23-291L24.4, Gm26070, Mab21l2 |
| Pituitary cells | Pomc, Gh, Prl, 4930544I03Rik, Cga, Fshb, Oacyl, Gnrhr, Gm14618, Pou1f1 |
| Podocytes | Magi2, Podxl, Nphs2, Srgap1, Ptpro, Nphs1, Sema3g, Rhpn1, Wt1os, Gm9946 |
| Principal cells | Muc20, Klhl14, Ptplad2, Bcam, Muc1, D630044L22Rik, Sesn3, Gstm2, Sbspon, A930017K11Rik |
| Proximal tubule cells | Fgf1, Gcnt1, Fut9, Keg1, Lrp2, Slc7a13, Slc6a18, Gm20400, Slc6a15, Sugct |
| Pulmonary neuroendocrine cells | Rad51b, Piezo2, Gm12474, Tnfaip2, Colgalt2, Ascl1, Thbs1, Mettl11b, Tcerg1l, Samd1 |
| Purkinje neurons | Grid2, Anks1b, Itpr1, Cntnap5b, Rgs8, Aldoc, Kcnab1, Arhgef33, Atp1a3, Slc1a6 |
| Rdh16 positive cells | Dcdc2a, Dnah14, Spag16, Gpr64, Agbl4, Ctnna3, Esr1, Macrod2, Spata16, Nasp |
| Secretory cells | Aox1, Bpifa1, 2010007H06Rik, Megf6, Muc5b, Scgb3a1, Gm29455, RP23-227A12.5, Neil2, Gabrp |
| Sis positive cells | Nek10, Slc46a1, Gm16054, Pdx1, Hes2, Ltb4r2, Gm15816, Krt12, Otop3, Sphk2 |
| Skeletal muscle cells | Myh1, Myh8, Rbfox3, Mrvi1, Rxfp1, Mical3, Tnnc2, Ror2, Mb, Tnnt3 |
| Striatal neurons 1 | Pde7b, Gpr88, Pde1b, Drd2, C030005K15Rik, Drd1a, Gpr6, Epyc, Krt9, Gm10754 |
| Striatal neurons 2 | Mir187, Gm13112, Sox1, Gm12665, Prok2, Gm5607, Gm10421, Gm15740, Npy5r, Drd3 |
| Tenocytes | Col1a1, Col2a1, Col1a2, Sparc, Col11a1, Ibsp, Comp, Col24a1, Chad, Ust |
| Thick ascending limb of LOH cells | Egf, Tmem207, Top3b, Cldn16, Gpx6, Gm14002, Gm17225, Tarm1, Nccrp1, 4930461G14Rik |
| Tuft cells | Dclk1, Ptbp2, Reg1, St18, Hck, Gnat3, Prap1, Trpm5, Rgs13, Ccnj |
| Type A intercalated cells | Oxgr1, 1700028J19Rik, Gm9871, RP24-79E2.3, Tmem61, 1700009J07Rik, 4930563D23Rik, 2410003L11Rik, Rhbg, 2610016A17Rik |
| Type B intercalated cells | Car12, Slc26a4, Slc4a9, Gm12121, Insrr, C630028M04Rik, Zcchc16, Hmx2, Atp6v1g3, Gm16353 |
| Type I alveolar epithelial cells | 4930522O17Rik, Pitpnm3, Bik, Gm15809, 2310007B03Rik, Thnsl1, Sorbs3, Wnt3a, Gm16212, Rps14 |
| Type I myonuclei | Tpm3, Gm10801, Mybpc1, Gm10800, Igfn1, Obscn, Actn2, Frmd4b, Dkk2, Amotl1 |
| Type II alveolar epithelial cells | C77370, Malt1, Cxcl15, Fam150a, Rmdn2, Gm28856, RP23-23C9.1, RP23-436F15.6, Gm18595, C87198 |
| Type II myonuclei | Gm26740, Atp2a1, Agbl1, Fbxo32, Ckm, Pdzrn3, Ampd1, Eya4, Mypn, Tbx15 |
| Unipolar brush cells | Glra2, 9330154J02Rik, RP23-340C13.5, 1700109G14Rik, Gm28652, Cbln1, En2, Gm5089, Gm6030, Gm27008 |
| Urothelial cells | E230016M11Rik, Snx31, Krt15, Padi1, Gm13219, Upk1a, Olfr890, Phlda3, Upk2, Nipal4 |
| Vascular endothelial cells | Cacna1c, Airn, Tnnt2, Sorbs2, Rbm20, Ryr2, Mybpc3, Ppm1e, Myom2, Pln |
| Vascular endothelial cells_Aerocytes | Gm13816, Gm17158, RP24-74O18.3, Pink1, Gipc3, Gm10287, Gm16564, Zfp697, Prrt4, Begain |
| Vascular endothelial cells_General capillary cells | Fcgr2b, Plat, Ackr3, Ecscr, Gm20631, Adcy4, Ankrd63, RP23-462P13.1, Fam71f2, Tmem44 |
| Vascular leptomeningeal cells | Ptgds, Fndc3c1, Gm6425, Gm17043, Alx3, 2310005E17Rik, Gm12829, Lama1, Gm29521, RP23-340C13.5 |
| Ventricular cardiomyocytes | Dmd, Cacna1d, Grm1, Zfpm2, D830032E09Rik, Cdh2, Tmtc1, Tlr4, Esrrb, 0610040F04Rik |
