Human Lung Reference Explorer

Annotation Markers

annotation.l1
LabelOBO Ontology IDMarkers
Alveolar Epithelial Type 1type I pneumocyteEMP2, AGER, GPRC5A, LMO7, RTKN2, ARHGEF26, LAMA3, DST, SPOCK2, SCEL
BB cellMS4A1, BANK1, LINC00926, CD79A, BLK, CD79B, VPREB3, SP140, CD22, ADAM28
Basalbasal cellKRT15, S100A2, KRT17, KRT5, KRT19, PERP, CLDN1, FHL2, DST, ITGA2
CD14+ MonocyteCD14-positive, CD16-negative classical monocyteS100A9, S100A12, S100A8, VCAN, FCN1, CD300E, CTSS, CD99, CSF3R, METTL9
CD4 TCD4-positive, alpha-beta T cellCD2, IL7R, TRAT1, BCL11B, ITK, CAMK4, CD6, LEF1, MALAT1, MAL
Ciliatedciliated cellRSPH1, CAPS, FAM92B, CDHR3, CCDC170, SNTN, C20orf85, ZMYND10, DNAH6, FANK1
Dendriticdendritic cellHLA-DPB1, FCGR2B, HLA-DMB, CLEC10A, CSF2RA, MS4A6A, HLA-DQA1, RGS1, GPR183, FPR3
FibroblastfibroblastFBLN1, ADH1B, DCN, LUM, C1S, C1R, SLIT2, C3, CFD, ABLIM1
Lymphaticlymphatic vesselCCL21, MMRN1, PROX1, PPFIBP1, TFF3, TBX1, PKHD1L1, IGFBP7, TFPI, TIMP3
MacrophagemacrophageACP5, C1QA, C1QB, VSIG4, MARCO, OLR1, APOC1, SLCO2B1, GPD1, ITGAX
Natural Killernatural killer cellPRF1, NKG7, KLRF1, CD247, GNLY, PYHIN1, KLRD1, SPON2, FCGR3A, GZMB
Plasmaplasma cellMZB1, DERL3, SEC11C, XBP1, TNFRSF17, SSR4, POU2AF1, HSP90B1, PRDX4, MANF
Alveolar Epithelial Type 2type II pneumocyteSFTPA1, SFTPA2, NAPSA, SFTPB, SFTPD, SFTPC, SLC34A2, ABCA3, LAMP3, LPCAT1
Basophil/Mastmyeloid leukocyteKIT, CPA3, TPSAB1, HPGDS, VWA5A, MS4A2, HDC, CD44, GATA2, GRAP2
CD16+ MonocyteCD14-low, CD16-positive monocyteLST1, LILRB2, AIF1, COTL1, SAT1, FCN1, FCGR3A, RPS19, RHOC, IFITM2
CapillarycapillaryFCN3, EPAS1, RAMP3, CDH5, PODXL, BTNL9, NOSTRIN, FLNB, CDC42EP1, CD81
CD8 TCD8-positive, alpha-beta T cellCCL5, CD3D, NKG7, GZMH, CD3G, CD8A, GZMA, CD8B, RPS27, RPL34
Clubclub cellSCGB3A2, CYB5A, SFTPB, PIGR, C16orf89, CTSE, KIAA1324, CEACAM6, WFDC2, DSTN
Myofibroblastmyofibroblast cellCOL1A1, COL1A2, COL3A1, COL6A3, ASPN, LTBP1, ITGBL1, CALD1, POSTN, BGN
Plasmacytoid Dendriticplasmacytoid dendritic cellPPP1R14B, IRF4, GZMB, IL3RA, IRF7, PLD4, SEC61B, PTPRE, NPC2, TYROBP
Proliferating MacrophagemacrophageH2AFZ, CDK1, UBE2C, ANLN, BIRC5, NUSAP1, STMN1, TPX2, TYMS, KPNA2
Proliferating NK/TlymphocyteNUSAP1, TOP2A, HMGB2, BIRC5, H2AFV, SMC4, CENPF, AURKB, UBE2C, KIF2C
Bronchial Vesselbronchial epithelial cellPLVAP, ZNF385D, SPRY1, POSTN, SPARCL1, VWF, EMCN, COL15A1, INHBB, ENPP2
Mucousmucus secreting cellSCGB3A1, BPIFB1, SLPI, LCN2, WFDC2, SAA1, SCGB1A1, RARRES1, MUC5B, MSMB
VeinveinVWF, SELP, SLCO2A1, LIFR, PLA1A, PTPRB, PRSS23, CPE, TGM2, SRPX
Pericytepericyte cellCOX4I2, PDGFRB, TACC1, CALD1, NID1, COL4A1, COL4A2, LAMB1, LAMC3, CHN1
Smooth Musclesmooth muscle cellTPM2, ACTA2, MYL9, MYH11, CALD1, DSTN, CNN1, DES, PLN, CSRP1
ArteryarteryDKK2, PTPRB, EFNB2, EPAS1, GJA5, HEY1, ARGLU1, FBLN5, SEMA3G, BMX
Capillary Aerocytecapillary endothelial cellHPGD, APP, EDNRB, EMCN, ESAM, STXBP6, CLDN5, CYP3A5, SOSTDC1, TBX2
Capillary Intermediatecapillary endothelial cellEPAS1, SH3BP5, RALA, PECAM1, WWTR1, GALNT18, ACVRL1, SRSF11, VAT1, IPO7
LipofibroblastfibroblastWT1, STEAP1, MEDAG, OSR1, CPXM1, FGF7, CCDC71L, HAS1, C3, C7
Mesothelialmesothelial cellGALNT9, ITLN1, WT1, PRG4, MGARP, C3, ALDH1A3, DMKN, SLPI, DSC3
Platelet/Megakaryocytemyeloid cellTUBB1, CMTM5, ACRBP, PF4, GP9, TMEM40, ITGA2B, GRAP2, GP6, CABP5
Natural Killer Tmature NK T cellGNLY, CD7, CTSW, CCL5, CD2, ZFP36L2, CXCR4, LGALS1, CEBPB, S100A6
Fibromyocytesmooth muscle cellSCX, FAM150A, HSPB3, RAMP1, CSRP1, CNN1, CST5, IGF1, CLU, MET
Gobletgoblet cellS100P, FAM3D, CXCL17, GABRP, WFDC2, PSCA, AGR2, TXN, CLIC1, COX5A
IonocyteionocytePHGR1, ASCL3, HEPACAM2, FOXI1, TMPRSS11E, ATP6V1B1, BSND, TFF3, STAC2, MFSD6L
Neuroendocrineneuroendocrine cellPCSK1N, BEX1, SEC11C, CPE, NENF, PRDX2, CHGA, EGR1, FAM46A, SCGN
Serousserous secreting cellZG16B, LYZ, PRB4, PRB3, PRH2, PRR4, TCN1, LPO, PHB, TESC
annotation.l2
LabelOBO Ontology IDMarkers
Adventitial FibroblastfibroblastFBLN1, C3, CCDC80, DCN, SFRP2, IGFBP6, SCARA5, PIK3R1, LAMA2, USP53
Alveolar Epithelial Type 1type I pneumocyteEMP2, AGER, LMO7, GPRC5A, RTKN2, ARHGEF26, LAMA3, DST, SPOCK2, SCEL
Alveolar FibroblastfibroblastA2M, SCN7A, GPC3, ADH1B, MYH10, RARRES2, LUM, AOC3, C7, CFD
BB cellMS4A1, BANK1, LINC00926, CD79A, BLK, CD79B, CD22, SP140, VPREB3, ADAM28
CD4+ Memory/Effector TCD4-positive, alpha-beta T cellCD2, CD3D, CD96, IL7R, ITK, PTPRC, CD3E, MALAT1, PDCD4, GPR171
Ciliatedciliated cellRSPH1, FANK1, CDHR3, CAPS, C20orf85, FAM92B, MS4A8, MALAT1, ANKRD36C, SLCO3A1
Classical Monocyteclassical monocyteS100A9, S100A8, S100A12, VCAN, FCN1, MNDA, FPR1, SELL, ZFP36L2, MYO1F
Lymphaticlymphatic vesselCCL21, MMRN1, PROX1, PPFIBP1, TBX1, TFF3, PKHD1L1, IGFBP7, TIMP3, TFPI
MacrophagemacrophageACP5, MARCO, OLR1, APOC1, MSR1, VSIG4, CYP27A1, SLCO2B1, GPD1, ITGAX
Natural Killernatural killer cellNKG7, PRF1, KLRF1, CD247, GNLY, PYHIN1, KLRD1, TXK, SPON2, SH2D1B
Plasmaplasma cellMZB1, DERL3, SEC11C, XBP1, TNFRSF17, SSR4, POU2AF1, HSP90B1, PRDX4, MANF
Alveolar Epithelial Type 2type II pneumocyteNAPSA, SFTPD, ABCA3, SFTPA1, SFTPA2, SFTPB, SLC34A2, MAP7D1, GPRC5A, CLDN1
OLR1+ Classical Monocyteclassical monocyteIL1B, SOD2, CXCL8, G0S2, EREG, CCL20, SRGN, CXCL3, CXCL2, C15orf48
CapillarycapillaryFCN3, EPAS1, RAMP3, CDH5, PODXL, BTNL9, IL7R, CD81, ATP6V0B, THBD
Clubclub cellSCGB3A2, SFTPB, CYB5A, PIGR, C16orf89, CTSE, KIAA1324, CEACAM6, WFDC2, DSTN
Intermediate Monocyteintermediate monocyteCOTL1, LILRA2, ADGRE2, FCN1, FGR, LILRB2, AIF1, BACH1, TRABD, MFNG
Myeloid Dendritic Type 1myeloid dendritic cellCSF2RA, CCL22, CCR7, FSCN1, DAPP1, BIRC3, LAMP3, TXN, ID2, GSN
Myeloid Dendritic Type 2myeloid dendritic cellCD1C, HLA-DPB1, HLA-DPA1, HLA-DQA1, HLA-DQB1, HLA-DRA, FCER1A, IL2RG, CD1E, PKIB
Myofibroblastmyofibroblast cellCOL1A1, COL1A2, COL3A1, ASPN, LTBP1, COL6A3, ITGBL1, COL12A1, CTHRC1, TGFBI
Plasmacytoid Dendriticplasmacytoid dendritic cellPPP1R14B, IRF4, GZMB, IL3RA, IRF7, SMPD3, PLD4, PTPRE, NPC2, TYROBP
Proliferating MacrophagemacrophageH2AFZ, CDK1, UBE2C, ANLN, NUSAP1, RHEB, TYMS, TPX2, BIRC5, KPNA2
Proliferating NK/TlymphocyteNUSAP1, TOP2A, HMGB2, BIRC5, H2AFV, SMC4, CENPF, AURKB, UBE2C, KIF2C
Basalbasal cellKRT15, S100A2, KRT17, KRT5, KRT19, LAMB3, SFN, TNS1, CCND2, DST
Bronchial Vessel 1bronchial epithelial cellPLVAP, ZNF385D, POSTN, SPRY1, SPARCL1, VWF, EMCN, COL15A1, ENPP2, INHBB
CD8+ Naive Tnaive thymus-derived CD8-positive, alpha-beta T cellCCL5, CD3D, GZMA, NKG7, CD3E, GZMB, CD2, ITGB1, LGALS1, CLIC3
Mucousmucus secreting cellSCGB3A1, BPIFB1, LCN2, SLPI, WFDC2, SCGB1A1, SAA1, RARRES1, MUC5B, MSMB
VeinveinVWF, SELP, SLCO2A1, LIFR, PLA1A, PTPRB, PRSS23, C7, CPE, ACKR1
Airway Smooth Musclerespiratory system smooth muscleTPM2, DSTN, ACTA2, FLNA, MYH11, MYL9, PLN, CASQ2, KCNAB1, RERGL
EREG+ Dendriticdendritic cellAREG, PLAUR, MXD1, GPR183, EREG, CSF2RA, RAB31, HLA-DPB1, HLA-DQA1, HLA-DRA
Pericytepericyte cellCOX4I2, PDGFRB, CALD1, TACC1, COL4A1, NID1, COL4A2, LAMC3, PTN, KCNK3
ArteryarteryDKK2, PTPRB, EFNB2, EPAS1, GJA5, HEY1, ARGLU1, FBLN5, SEMA3G, BMX
Basophil/Mast 1myeloid leukocyteCPA3, KIT, HPGDS, TPSAB1, SLC18A2, MS4A2, RGS13, GNPTAB, KIF13B, HIPK2
Capillary Aerocytecapillary endothelial cellHPGD, APP, EDNRB, EMCN, ESAM, STXBP6, PRX, CYP3A5, SOSTDC1, TBX2
Capillary Intermediate 2capillary endothelial cellEPAS1, SH3BP5, WWTR1, RALA, PECAM1, GALNT18, ARHGAP29, VAT1, SRSF11, YWHAB
Bronchial Vessel 2bronchial epithelial cellTM4SF1, SOX17, SOCS3, EMP1, ITPRIP, ARID5A, ESAM, RGCC, CD200, LPAR6
IGSF21+ Dendriticdendritic cellFOLR2, MS4A6A, STAB1, F13A1, FCGR2A, C1QA, CTSB, LGMN, MAF, CCL13
Proliferating Basalbasal cellNMU, PTTG1, TOP2A, BIRC5, CENPF, TPX2, CKAP2, MKI67, HMGB2, CENPE
Nonclassical Monocytenon-classical monocyteLST1, AIF1, FCGR3A, LILRB2, BID, CTSS, COTL1, NAAA, SPN, LYPD2
CD8+ Memory/Effector TCD8-positive, alpha-beta T cellDUSP2, CCL5, CD8A, CST7, NKG7, CD3E, IL32, RPL34, IL7R, TC2N
CD4+ Naive Tnaive thymus-derived CD4-positive, alpha-beta T cellMAL, LTB, CCR7, SIRPG, NOSIP, LEF1, IL23A, TSHZ2, TSR1, ATF7IP2
Differentiating Basalbasal cellPERP, GPR87, AQP3, PROM2, RAB25, KRT19, BAG1, KRT7, XBP1, PLA2G10
LipofibroblastfibroblastWT1, STEAP1, FGF7, MEDAG, OSR1, CPXM1, CCDC71L, PTMA, DMKN, PPA1
Mesothelialmesothelial cellGALNT9, ITLN1, WT1, MGARP, PRG4, ALDH1A3, C3, C1S, SERPING1, GFPT2
Platelet/Megakaryocytemyeloid cellTUBB1, CMTM5, ACRBP, PF4, GP9, CABP5, ITGA2B, WRB, MAP3K7CL, GRAP2
TREM2+ Dendriticdendritic cellAPOE, CHIT1, PLA2G2D, SLAMF8, PLA2G7, LILRB4, CAPG, CSTB, PDXK, APOC1
Signaling Alveolar Epithelial Type 2type II pneumocyteSFTPC, SFTPA1, SFTPA2, NAPSA, SLC34A2, SFTPB, SELENBP1, SLPI, FABP5, ARC
Natural Killer Tmature NK T cellGNLY, CD7, CTSW, CCL5, CD2, ZFP36L2, CXCR4, LGALS1, DUSP4, S100A6
Capillary Intermediate 1capillary endothelial cellEDNRB, AQP1, HPGD, CNN3, HLA-E, CLDN5, TMEM204, FCN3, EDN1, VWF
Vascular Smooth Musclevascular associated smooth muscle cellREM1, TPM1, ACTA2, TAGLN, CALD1, NEXN, MYH11, FSTL1, THY1, CFH
Basophil/Mast 2myeloid leukocyteGPR65, SRGN, TNFRSF9, TPSAB1, CD69, BIRC3, GATA2, AREG, ICAM1, KDM6B
Fibromyocytesmooth muscle cellSCX, CNN1, FAM150A, PDLIM7, HSPB3, MYLK, RAMP1, SCUBE1, CSDC2, TBC1D10A
Gobletgoblet cellS100P, CXCL17, FAM3D, WFDC2, GABRP, LCN2, PSCA, C3, MSMB, ZG16B
IonocyteionocyteASCL3, HEPACAM2, FOXI1, TMPRSS11E, ATP6V1B1, BSND, TMEM61, SMIM11, PSMG1, BIK
Neuroendocrineneuroendocrine cellPCSK1N, BEX1, SEC11C, CPE, NENF, PRDX2, CHGA, EGR1, FAM46A, SCGN
Proximal Basalbasal cellSERPINB13, SERPINB4, KRT19, CLCA2, KRT5, PERP, ADH7, TSPAN8, SUSD4, CLCA4
Proximal Ciliatedciliated cellC1orf189, LINC01571, CALML4, CH17-340M24.3, AKAP14, CD24, HCG14, TP53AIP1, MRPL41, UCP2
Serousserous secreting cellZG16B, LYZ, PRB4, PRB3, PRH2, PRR4, TCN1, LPO, PHB, TESC