Human Fetal Development Reference Explorer

Annotation Markers

annotation.l2
LabelMarkers
Adrenal-MegakaryocytesITGA2B, STAR, ITGB3, CYP17A1, PF4, SULT2A1, PLEK, HSPE1, GP1BA, DHCR24
Liver-MegakaryocytesLTBP1, ALB, ITGB3, HBA1, ITGA2B, HBG2, MED12L, HBA2, PF4, AFP
Lung-MegakaryocytesITGB3, PF4, HLA-A, GP9, ITGA2B, CTTN, PPBP, TUBB1, LGALSL, GP1BA
Heart-MegakaryocytesTUBB1, PPBP, KIT, PF4, ACTC1, CPA3, TTN, HDC, CD44, GP9
Placenta-MegakaryocytesAC108463.2, SETP11, ARHGEF19, CTD-2227I18.1, SPOCD1, C6orf25, WDR64, PDYN, AC109829.1, OXSM
Kidney-MegakaryocytesGCSAML, RARB, ITGA2B, TM4SF18, HPSE, CHRM3, PPBP, MYO1B, RP11-556I14.2, CD86
Spleen-MegakaryocytesPF4, PEX16, AC002366.3, RNASET2, RP11-556I14.2, CNTN1, ITGA2B, HSPG2, GP9, SEC24D
Muscle-MegakaryocytesGRXCR2, SLAMF6, GLYATL1P1, RP11-469M7.1, RP11-1006G14.2, MST1R, LY6G6F, RP11-689K5.3, TREML2, GTF2H2C
Eye-Ganglion cellsANK2, CADM2, KCNIP4, ROBO2, NRG3, CTNNA2, MDGA2, EPHA6, RALYL, EBF1
Placenta-Stromal cellsLAMA2, MEG3, PHACTR2, CNTN5, AC011288.2, COL6A2, PRLR, SLIT2, HGF, BMP5
Spleen-Stromal cellsLEPREL1, CTC-535M15.2, GRIK2, ADRA1D, TMTC1, CACNA1D, TSHZ2, HBA1, MAMDC2, CLIC5
Thymus-Stromal cellsPOSTN, IKZF1, CCR9, RP11-94L15.2, DCN, THBS2, CD5, ISLR, CD3E, COL1A1
Adrenal-Stromal cellsCOL1A1, COL1A2, COL3A1, STAR, CYP11A1, CYP17A1, DHCR24, C7, FDX1, COL12A1
Muscle-Stromal cellsCOL3A1, COL1A2, CDH18, COL1A1, POSTN, FNDC1, DCN, RP11-554D15.1, COL5A2, DLK1
Lung-Stromal cellsPIEZO2, FAM155A, SLIT2, CCBE1, FAT3, MEOX2, ARHGAP28, PRKCB, PLEKHH2, A2M
Pancreas-Stromal cellsCOL1A1, RELN, COL3A1, SFRP1, COL1A2, ALDH1A1, IGF2, DCN, HSPB6, COL6A2
Heart-Stromal cellsCOL1A1, TBX20, COL1A2, COL3A1, DCN, COL6A2, FBLN2, COL5A1, ELN, POSTN
Intestine-Stromal cellsHPSE2, THSD4, CDH13, FNDC1, UNC5D, CXCL14, COL1A1, FENDRR, SHANK2, GPC6
Kidney-Stromal cellsPRRX1, MTND4P12, SCARA5, CTNNA2, SFRP2, EBF2, IGFBP5, COL12A1, PPARG, POSTN
Stomach-Stromal cellsPITX1, COL1A2, EGR1, COL3A1, NELL1, COL1A1, NLGN1, POSTN, LPHN3, DCN
Eye-Stromal cellsPI16, SFRP2, CRYAA, CRYBB1, CRYGC, DCN, MFAP5, COL1A1, KCNB2, COL1A2
Adrenal-Adrenocortical cellsSTAR, CYP17A1, SCARB1, DLK1, DHCR24, FDX1, CYP11A1, LDLR, RBM47, SH3BP5
Pancreas-Lymphatic endothelial cellsNTS, CTSS, UBD, SELM, FOXC2, SELE, STAB2, CXCL2, PTGS2, NNMT
Lung-Lymphatic endothelial cellsCCL21, TFPI, PRKG1, STAB2, SEPP1, PROX1, IGFBP7, RELN, IGFBP4, NRP2
Intestine-Lymphatic endothelial cellsRP11-322E11.5, USP20, TSPEAR, ITPR2, P4HA3, CACNA1C, CTC-458G6.2, GPSM2, RP11-451M19.3, NRG1
Muscle-Lymphatic endothelial cellsCCL21, MYL1, MMRN1, TSPEAR, ACTA1, LYVE1, BSCL2, MPP7, CEP19, NFATC1
Heart-Lymphatic endothelial cellsCCL21, DKK3, MMRN1, NTS, NRG3, TFPI, VWF, LYVE1, GUCY1A3, STAB2
Stomach-Lymphatic endothelial cellsPWWP2AP1, RP5-1180C18.1, C3orf55, AC022182.3, IRF4, RP11-799O21.2, WNT16, ABHD17AP6, RP11-77H9.8, CTD-2586B10.1
Adrenal-Myeloid cellsCD74, C1QC, STAR, DLK1, CYP17A1, DHCR24, AOAH, SULT2A1, C1QB, CYP21A2
Heart-Myeloid cellsCD74, TTN, HLA-DRA, TPM1, HLA-DRB1, COL1A1, HLA-DPB1, COL3A1, HLA-DPA1, VIM
Lung-Myeloid cellsCD74, VCAN, HLA-DRB1, MALAT1, HLA-DRA, CLNK, HLA-DPA1, CCSER1, HLA-DPB1, F13A1
Kidney-Myeloid cellsSRGN, MTND4P12, CD74, NR4A3, SAMHD1, LGMN, FOS, CSF1R, PLAUR, HLA-DRA
Muscle-Myeloid cellsF13A1, MYL1, NCF4, TMEM97, HLA-DOA, CTBS, HLA-DMA, TPM2, SIGLEC1, SIRPB2
Liver-Myeloid cellsALB, MS4A7, HBA1, FYB, HBG1, LGMN, HBG2, ADAP2, HBA2, C1QC
Intestine-Myeloid cellsCD74, DNASE1L3, SRGN, SEMA6B, SAMHD1, UTRN, AOAH, XYLT1, HLA-DRB1, PELI1
Placenta-Myeloid cellsCXCL9, GPNMB, F13A1, C1QC, GABRA3, TFEC, TFCP2L1, HLA-DPA1, DNASE2, HLA-DRA
Pancreas-Myeloid cellsCD74, FTH1, HLA-DRA, RPS27, HLA-DPA1, PFN1, SPI1, FOS, PLD4, CLPS
Spleen-Myeloid cellsRP11-1080G15.1, HBA2, CD5L, MALAT1, CR1, TIMD4, VCAM1, CD163, HBA1, CD163L1
Stomach-Myeloid cellsASTL, CDCA4, HLA-DRB5, SUV39H2, HLA-DQA1, IDO1, HLA-DRA, SRP19, RP11-15B24.5, GIPR
Lung-Bronchiolar and alveolar epithelial cellsATP11A, CPM, MECOM, SFTPB, SFTPC, FGFR2, SFTA3, ETV5, ROS1, WIF1
Adrenal-Vascular endothelial cellsLDB2, PPAP2B, FLT1, EMCN, F8, SULT2A1, CYP17A1, DLK1, STAR, IGF2
Lung-Vascular endothelial cellsEPAS1, NCKAP5, CALCRL, KHDRBS2, CD93, VWF, AFF3, APLNR, PDE3B, FENDRR
Muscle-Vascular endothelial cellsCAV1, TNNC2, PRND, FABP4, APLNR, GPIHBP1, COL15A1, IGF2, CDH5, VWF
Heart-Vascular endothelial cellsCAV1, COL15A1, MYL7, SLC9C1, MYH7, FABP4, ACTC1, EMCN, MYL2, CDH5
Pancreas-Vascular endothelial cellsHSPG2, MADCAM1, PLVAP, CLPS, PTRF, COL15A1, IGFBP4, APLNR, CD93, FLT1
Cerebrum-Vascular endothelial cellsIGFBP7, FN1, CLDN5, CDH2, ITM2A, SLC38A5, SLC7A1, CDH11, SLC7A5, ABCB1
Stomach-Vascular endothelial cellsBDKRB2, PLXND1, STK32B, APLNR, ECHDC1, PLEKHG1, KCNN3, ERG, RASGRF2, KANK3
Kidney-Vascular endothelial cellsIGFBP5, MEIS2, CHRM3, LDB2, KCNIP4, PLVAP, ASIC2, PPAP2B, LINC00478, HSPG2
Eye-Vascular endothelial cellsSELP, RP11-89K21.1, CRYAA, SIX3, PKD1L1, CTD-3179P9.1, SGCZ, RP11-187O7.3, SEMA3A, TM4SF18
Liver-Vascular endothelial cellsLDB2, STAB2, PPAP2B, ALB, SLC9A9, ATRNL1, RELN, CRHBP, ACSM3, EDA
Cerebellum-Vascular endothelial cellsIGFBP7, ITM2A, FN1, CLDN5, SLC7A5, MFSD2A, SLC39A10, FLT1, SLC7A1, SLC38A5
Spleen-Vascular endothelial cellsAC010084.1, SNTG1, TGFBR3, FGF12, HBA2, LDB2, DYSF, APLNR, HBG2, PTPRB
Placenta-Vascular endothelial cellsCTD-3006G17.2, MEOX2, HSD17B2, LIN28B, FCGR2B, AC011288.2, IDO2, IGF1, TFPI2, RP11-184E9.1
Intestine-Vascular endothelial cellsMADCAM1, PLVAP, HSPG2, DIAPH2, FLT1, CEL, PTPRM, CALCRL, PLCB1, RASIP1
Thymus-Vascular endothelial cellsRP11-221J22.1, RASA4DP, CD1E, AC005550.4, RP11-306K13.1, TSLP, CTD-3179P9.2, KB-1683C8.1, RP11-103J17.2, RP11-973H7.4
Spleen-STC2_TLX1 positive cellsHBA2, HBA1, HBG2, HBG1, COL1A1, FBLN5, VCAM1, CXCL13, STC2, TLX1
Muscle-Satellite cellsCLCN5, OLFML2A, NEB, MATN2, MEGF10, FLNC, PAX7, FGFR4, CDH15, CALCR
Cerebrum-AstrocytesNPAS3, GPC5, PTPRZ1, CTNNA2, NRXN1, LRP1B, PTN, CADM2, LSAMP, TANC2
Cerebellum-AstrocytesGRID2, PTN, ANKS1B, DACH1, NPAS3, GRIA4, SLC1A3, NRG1, CTNND2, DSCAM
Eye-AstrocytesWIF1, RP11-766N7.4, CPM, RP11-133F8.2, PAX5, CLEC18B, PAX8, SLC1A3, ADAMTS18, RP11-776H12.1
Adrenal-SympathoblastsCHGA, CHGB, DPP6, FGF14, RGS5, AGBL4, CACNA2D3, DBH, SLC24A2, SLC18A1
Kidney-Ureteric bud cellsMECOM, NAALADL2, PKHD1, INADL, PAX8, GATA3, COBLL1, BMPR1B, DCDC2, PAX2
Cerebrum-MicrogliaPLXDC2, PDE4B, DOCK4, ST6GALNAC3, SFMBT2, FRMD4A, EPB41L2, SLC9A9, UTY, SPP1
Cerebellum-MicrogliaPLXDC2, SPP1, PTPRG, DOCK4, RTTN, SFMBT2, RPLP1, SLC9A9, APOE, DOCK8
Eye-MicrogliaOSCAR, KYNU, RP11-480C22.1, ACOT2, TIGD4, SLC9A7, TLR2, PHF5A, LY86, HLA-DPA1
Cerebrum-Limbic system neuronsPTPRD, NTNG1, RNF220, CNTNAP2, NRXN1, TENM2, RIMS2, RBFOX1, ERC2, MEG3
Cerebellum-Inhibitory interneuronsNRXN3, UNC5C, XKR4, NRXN1, NKAIN2, GRID2, CSMD1, ADARB2, ANKS1B, MSRA
Adrenal-Chromaffin cellsRBFOX1, RGS5, STMN2, CACNA2D3, RBMS3, DLC1, CHGB, KCNQ5, ALCAM, CNTNAP2
Intestine-Chromaffin cellsFEV, CACNA1A, MLN, DACH1, CCK, RFX6, DSP, AC018359.1, TPH1, PDE4D
Cerebrum-OligodendrocytesLSAMP, ZBTB20, LHFPL3, DSCAM, CSMD1, NRXN1, PTPRZ1, KCTD16, KCND2, AC007682.1
Cerebellum-OligodendrocytesCSMD1, CNTNAP2, LSAMP, ROBO2, KCND2, CNTNAP5, LHFPL3, NRXN3, PCDH15, XIST
Heart-Endocardial cellsCOL3A1, POSTN, VIM, CDH11, HSPG2, EMCN, FN1, CALCRL, ENG, HMCN1
Eye-Photoreceptor cellsCADM2, MARCH1, SYT1, EYS, RORB, FSTL5, GALNT13, MPPED2, CADPS, ZNF385B
Adrenal-ErythroblastsHBG1, CYP17A1, HBG2, STAR, HBA1, HBA2, SULT2A1, SLC25A37, DLK1, ANK1
Liver-ErythroblastsHBG2, HBA1, NFIA, HBA2, AFP, ANK1, ZDHHC14, SLC25A37, CENPP, HBG1
Spleen-ErythroblastsHBA1, COL3A1, AHSP, COL1A1, HBA2, ELMO1, HBG1, COL6A2, HBG2, AKT3
Pancreas-ErythroblastsSLC25A37, HBG2, HBB, HBA1, HBM, AHSP, UCP2, ALAS2, ANK1, FTH1
Stomach-ErythroblastsAHSP, HIST1H1E, HBM, HBG2, HEMGN, SNX16, RNF224, CIAPIN1, SLC4A1, ALAS2
Kidney-ErythroblastsRNF224, HEMGN, HBG2, HBM, GATC, AHSP, ARHGAP10, SPTA1, TOPORS, ALAS2
Muscle-ErythroblastsRP5-1068B5.3, RP11-737O24.3, AC007317.1, AC007228.5, ADSSL1, RPS20P14, TMEM38A, RP5-890O15.3, TDH, DRP2
Intestine-ErythroblastsHBM, SLC4A1, HBA2, SPTA1, HBG2, AHSP, HBA1, ALAS2, HBG1, HEMGN
Intestine-ENS gliaZNF536, RALYL, CDH19, DLG2, GFRA1, BNC2, PRIMA1, ERBB4, INSC, MALAT1
Pancreas-ENS gliaPLP1, KCTD12, COL20A1, MGAT4C, SOX10, SCN7A, CDH19, RP11-202H2.1, PRIMA1, RPL7A
Stomach-ENS gliaU91328.19, PRIMA1, ATP6AP1, SOX10, ST6GALNAC2, HCFC1R1, CDH19, ABLIM3, RP11-308N19.1, NT5C
Spleen-Lymphoid cellsFAM129C, HBA2, MS4A1, HBG2, BANK1, HBA1, CARD11, RALGPS2, PAX5, ARHGAP24
Heart-Lymphoid cellsSKAP1, TTN, PTPRC, COL3A1, LCP1, COL1A2, LTB, HBA2, CD247, HBG1
Pancreas-Lymphoid cellsRPS3, PFN1, RPS12, PTPRC, RPLP2, HLA-B, RPL32, ARHGDIB, RPS8, ETS1
Lung-Lymphoid cellsARHGAP15, MALAT1, PTPRC, SKAP1, MBNL1, CD247, DPYD, PTPRCAP, ZBTB20, IL7R
Intestine-Lymphoid cellsCD247, ZBTB16, PTPN22, KIT, RUNX3, LZTFL1, LTB, COL23A1, TXK, ADAMTS17
Placenta-Lymphoid cellsGNLY, ENAM, NKG7, CSF1, IGJ, ITGAX, KLRC1, FNDC3B, IL2RB, ITGAD
Kidney-Lymphoid cellsCD69, MTND4P12, CD3E, MTND1P23, RHOH, SRGN, ITK, C1orf21, NKG7, NR4A3
Adrenal-Lymphoid cellsNKG7, PRF1, STAR, LINC00861, SULT2A1, PYHIN1, CYP21A2, GNLY, DHCR24, PTPRC
Liver-Lymphoid cellsIGLL1, PAX5, AFP, FAM129C, ALB, SERPINA1, ARHGAP15, HBG2, HBG1, IKZF3
Stomach-Lymphoid cellsCD6, C22orf34, CD52, NCBP1, RHOH, PKIA, TCF7, TBC1D15, GZMM, PTPRC
Muscle-Lymphoid cellsRTP4, CD2, CD6, SRSF8, CRTAM, ASPH, BATF, CPSF4, CD28, PPIL1
Muscle-Skeletal muscle cellsTTN, MYH3, NEB, ACTN2, MYLPF, MYL1, TPM2, MYBPC1, TNNC2, CA3
Eye-Skeletal muscle cellsCRYAA, MYH3, CRYBA1, TNNT1, CRYBB2, MYL1, BARX2, DUSP13, DACH1, NEB
Stomach-Mesothelial cellsAP000705.7, RP11-74M11.2, DCLRE1B, MSLN, SNTG1, NFATC2, NKAIN3, RP11-275N1.1, ARL17A, RSPO3
Lung-Mesothelial cellsAP000705.7, ELN, C3, TMTC2, ALDH1A2, LINC00842, MALAT1, SBSPON, SYNE1, PTPRQ
Liver-Mesothelial cellsAP000705.7, ALB, PKHD1L1, HBA2, BNC1, HBA1, HHIP, HBG2, RP11-275N1.1, HBG1
Intestine-Mesothelial cellsAP000705.7, ROBO2, HAS1, LRRTM4, LRRN4, LRRC4C, RP11-123O22.1, PCDH7, RP11-404P21.8, AKAP12
Spleen-Mesothelial cellsKLK11, HBG1, PLA2G2A, PRG4, HBG2, MSLN, HBA2, LHX9, HBA1, SLPI
Pancreas-Mesothelial cellsRP11-74M11.2, EGFL6, IL6, MAFF, BDKRB1, POSTN, HAS1, NAMPT, COL8A1, ATP2B1
Cerebellum-SLC24A4_PEX5L positive cellsCNTNAP2, FSTL5, GRM7, LRRTM4, LUZP2, GRM3, CSMD3, NRXN3, SLC24A4, PEX5L
Cerebrum-Excitatory neuronsRBFOX1, PTPRD, ROBO2, LRRC7, NRXN1, DLGAP1, GPM6A, NKAIN2, SOX5, TMEM108
Eye-Retinal progenitors and Muller gliaRORB, LGR4, SORCS1, GALNT13, CLVS1, CRB1, ILDR2, FAM184B, ADAMTS18, RP11-89K21.1
Cerebrum-SKOR2_NPSR1 positive cellsDAB1, GRID2, RORA, BAI3, FOXP2, AUTS2, DMD, NRG1, SKOR2, NPSR1
Liver-HepatoblastsALB, AFP, APOA1, APOA2, SERPINA1, APOB, HBA1, AHSG, IGF2, HBG2
Thymus-ThymocytesLEF1, BCL11B, CALN1, TFDP2, ARHGAP15, THEMIS, SATB1, IKZF2, RUNX1, TCF7
Cerebellum-Purkinje neuronsDAB1, GRID2, RORA, AUTS2, BAI3, NRG1, EBF1, GRIK1, FOXP2, LPHN2
Placenta-Syncytiotrophoblasts and villous cytotrophoblastsTENM3, FBN2, ARL15, EGFR, KANK1, ZFAT, SVEP1, RHOBTB1, RP11-30J20.1, MBNL3
Kidney-Mesangial cellsGPC3, KIAA1217, PALLD, MEIS2, MEIS1, FLRT2, TNC, NR2F2, KIF26B, CCBE1
Intestine-Smooth muscle cellsMYH11, FOXP2, TAGLN, ACTG2, DES, SORBS1, ACTA2, TMTC2, CNN1, KCNIP4
Pancreas-Smooth muscle cellsBGN, IGF2, NOTCH3, PDGFRB, ZFP36L1, PCDH18, EGR1, THBS4, FOS, NDUFA4L2
Heart-Smooth muscle cellsRGS5, PLA2G5, HBA2, ACTA2, HBG2, CYGB, HBG1, PDGFRB, HBA1, ABCC9
Placenta-Smooth muscle cellsHGF, FLT1, AC011288.2, AGTR1, LAMC3, PLCB1, ADAMTS18, LAMA2, TBX5, AFF2
Muscle-Smooth muscle cellsACTA2, MYLPF, EGFLAM, NOTCH3, DLGAP1, EBF2, MYH11, NCKAP5, ABCC9, BMP5
Eye-Smooth muscle cellsTYRP1, PMEL, TYR, TRPM1, MLANA, TEX41, MET, PAX3, TFAP2A, HR
Intestine-Intestinal epithelial cellsPCSK5, APOA1, C10orf112, RAB11FIP1, LGALS3, ARID3A, THRB, CPS1, MYH14, HNF4A
Cerebellum-Granule neuronsERBB4, GRIK2, RELN, NRG1, KCND2, CNTN5, NRXN1, SYT1, ROBO2, NELL2
Eye-Horizontal cellsNRXN3, RORB, CNTN4, ONECUT1, TNR, MEGF10, MEGF11, ONECUT2, CACNG3, TFAP2B
Cerebrum-Inhibitory neuronsNRXN3, CCSER1, CTNNA2, RBFOX1, LRRC7, MYT1L, GRIN2B, GRM5, RP11-85M11.2, MIR137HG
Heart-Schwann cellsMPZ, ROBO2, CDH19, INSC, XKR4, S100B, NPPA, RP11-141M1.3, BICD1, PLP1
Muscle-Schwann cellsMPZ, FSTL5, CDH19, POU3F1, TNNC2, FOXD3, PLP1, MYLPF, SOX10, MYH3
Adrenal-Schwann cellsOLFML2A, PLP1, APOE, MPZ, CYP17A1, FOXD3, DHCR24, CDH19, DLK1, SOX10
Pancreas-Islet endocrine cellsCHGA, PCSK1N, GNAS, ERO1LB, CPE, INS, CADPS, TTR, MEIS2, MAFB
Eye-Amacrine cellsNRXN3, MEIS2, CADM2, ZNF385D, RORB, DCC, SYT1, DSCAM, MIR181A1HG, RP11-689K5.3
Cerebellum-Unipolar brush cellsERBB4, NRXN1, LRP1B, NLGN1, LPHN3, CCSER1, PCDH9, UNC5C, STXBP5L, GRIA2
Stomach-MUC13_DMBT1 positive cellsDMBT1, CEA, KRT20, MUC13, FER1L6, PHGR1, HNF4G, ABCC3, HNF4A, CDH17
Pancreas-Acinar cellsCEL, SPINK1, CPA1, CTRB2, CLPS, SYCN, CPA2, GP2, CTRB1, DLK1
Kidney-Metanephric cellsDACH1, PAX2, EYA1, HMGA2, GPC3, TRABD2B, ITGA8, PTPN14, WT1, BMPER
Pancreas-Ductal cellsIGF2, SLC4A4, DLK1, ATP1B1, CFTR, FXYD2, JUN, CLU, SPINK1, H3F3B
Eye-Retinal pigment cellsTRPM1, TYR, COL8A1, SLC38A11, LINC00276, BEST1, RP11-690J15.1, RPE65, TYRP1, PMEL
Heart-CardiomyocytesTTN, MYL7, TNNT2, TPM1, ACTC1, SLC8A1, TNNC1, MYL4, MYH7, TNNI1
Stomach-Squamous epithelial cellsKRT19, PDE4D, KRT13, FOS, RAB11FIP1, PARD3, S100A6, CSMD1, ANXA1, EGR1
Lung-Squamous epithelial cellsSPRR3, TACSTD2, KRT13, KRT78, LGALS3, S100A9, TMPRSS11B, MT2A, IL1RN, ECM1
Stomach-Goblet cellsCLDN18, SPINK1, RAB11FIP1, AGR2, MUC6, LYZ, ELF3, GPRC5A, PPARG, PIK3C2G
Placenta-Extravillous trophoblastsFN1, FLT1, ISM2, NOTUM, PAPPA2, PRG2, ADAM12, FSTL3, QSOX1, SERPINE2
Pancreas-ENS neuronsCHRNA3, RNASE1, PHOX2B, GAL, CD81, VIP, NFIX, HMX2, TUBA1A, TLX2
Intestine-ENS neuronsKCNQ5, DPP6, EML5, FAM155A, PHOX2B, AUTS2, RP11-348J24.2, IQCJ-SCHIP1, FAM163A, KCND2
Stomach-ENS neuronsVIP, MRPS31P4, RP11-457K10.1, NAT9, SCG2, PIGO, ALK, FAM124A, CTA-481E9.3, ATP2B3
Heart-Visceral neuronsPRPH, RGS5, SST, CALM2, SLC5A7, RBMS3, C10orf85, ALCAM, NPY2R, STMN2
Lung-Visceral neuronsSLC18A3, RUNX1T1, PRPH, NELL2, VIP, ROBO2, GAL, NKAIN3, CHRNA3, SGCZ
Lung-Ciliated epithelial cellsCDHR3, TPPP3, CAPS, RPLP1, DNAH12, AGR3, LRRIQ1, OSBPL6, C4orf22, AGR2
Stomach-Ciliated epithelial cellsDNAH9, PSCA, DNAH12, PLCG2, C9orf117, S100A6, DNAH3, CLPS, AC079354.1, MUC16
Heart-Epicardial fat cellsC3, PRG4, CCDC80, SULF1, ITLN1, RP11-572C15.6, MSLN, CFH, AP000705.7, PLA2G2A
Stomach-Parietal and chief cellsESRRG, IGFBP5, FGD4, ATP4B, ATP4A, CLDN18, GIF, ARHGEF28, CLIC6, IGFBP2
Liver-Stellate cellsCOL25A1, IGFBP3, ALB, NR1H4, HHIP, CCBE1, HGF, COLEC11, COLEC10, PTH1R
Placenta-IGFBP1_DKK1 positive cellsLUM, IGFBP1, CD248, SCARA5, DKK1, APOD, GAS1, CHRDL1, SERPINE1, CFD
Eye-Bipolar cellsGRIK1, FSTL5, ZNF385B, ZNF804B, CA10, ZPBP, FAM19A4, VSX2, TRPC7, SLC1A7
Lung-Neuroendocrine cellsGRP, SEC11C, IGFBP5, ASCL1, NRG1, TFF3, NKAIN2, GHRL, HEPACAM2, RALYL
Stomach-Neuroendocrine cellsTPH1, GHRL, HS6ST3, CHGA, SLC38A11, CLDN18, LINC00261, HS3ST4, RFX6, DIP2B
Placenta-PAEP_MECOM positive cellsPAEP, AC073218.2, C1orf186, CP, MUC16, RP11-98L5.2, RP11-510D19.1, DEFB1, AC104654.1, MECOM
Eye-Corneal and conjunctival epithelial cellsS100A9, LYPD2, LCN2, MUC4, SLPI, KRT4, CP, MUC16, CEACAM6, MUC15
Liver-Hematopoietic stem cellsMPO, ALB, RNF220, ITGA4, RP5-964N17.1, RUNX1, ANGPT1, ARHGAP15, IQGAP2, GPR141
Adrenal-CSH1_CSH2 positive cellsCGB, MAGEA10, CGA, INSL4, PAGE4, KISS1, XAGE3, PSG9, CSH1, CSH2
Eye-Lens fibre cellsCRYBB1, CRYAA, CRYBB2, CRYBA4, CRYBA1, CRYGC, BFSP1, LIM2, MIP, BFSP2
Pancreas-CCL19_CCL21 positive cellsCCL19, FDCSP, CCL21, PTGDS, C1S, TNFSF11, CXCL13, CXCL12, PRRX1, SLC22A3
Placenta-Trophoblast giant cellsCSH1, PAPPA, ADAM12, CYP19A1, TFPI2, CSH2, CGA, PSG1, KISS1, FBLN1
Adrenal-SLC26A4_PAEP positive cellsSLC26A4, HSD3B2, RP11-328J2.1, LL0XNC01-16G2.1, BPIFB1, IL1A, MAP3K15, LINC00086, ASB4, PAEP
Placenta-AFP_ALB positive cellsRP4-794H19.1, BAAT, SLCO1B3, AHSG, SERPINA5, FGB, DUSP9, KNG1, AFP, ALB
Spleen-AFP_ALB positive cellsMBL2, HBA1, CFHR1, HBA2, RBP4, HBG2, FGG, SERPINA7, AFP, ALB
Thymus-Thymic epithelial cellsRP11-114G22.1, PRSS16, TBATA, FAM163A, AC005042.5, FOXN1, PAX1, MIR205HG, LY75, NEURL2
Eye-PDE11A_FAM19A2 positive cellsADAMTS18, MEGF10, PDE11A, POU6F2, PTPRR, CHAT, RP11-689K5.3, KCNAB1, RELN, FAM19A2
Thymus-Antigen presenting cellsRAG1, CCL19, HLA-DRA, CD74, CLNK, HLA-DRB1, HLA-DPB1, BIRC3, WDFY4, CIITA
Heart-SATB2_LRRC7 positive cellsFOXG1, NEUROD2, CDK5R1, SATB2, RBFOX1, GRIN2B, NKAIN2, FABP7, ARPP21, LRRC7
Heart-ELF3_AGBL2 positive cellsPLN, MYL3, MYL2, MYL7, MYH7, TNNC1, MB, TNNI1, ELF3, AGBL2
Heart-CLC_IL5RA positive cellsCLC, MS4A3, IL5RA, MYL3, HAND1, PLN, HSPB7, TNNT2, MYL7, MYH7
Stomach-PDE1C_ACSM3 positive cellsFOXI1, TFCP2L1, HEPACAM2, STAC2, ST14, CLNK, ATP6V0D2, BMPR1B, PDE1C, ACSM3
Cerebrum-MegakaryocytesPF4, PPBP, TUBB1, C6orf25, GP9, GP6, LY6G6F, TREML1, GP5, GP1BA
Heart-ErythroblastsLINC00705, SPRR2A, RPL24P2, SPATA41, RP11-389C8.3, SERPINB7, LY6K, PGBD4, RP11-215A21.2, EIF3C
Lung-CSH1_CSH2 positive cellsCSH1, CSH2, PSG1, PSG2, PSG3, PSG4, PSG11, ENDOU, XAGE3, KISS1
annotation.l1
LabelMarkers
MegakaryocytesLTBP1, ITGB3, ITGA2B, PF4, THBS1, PLEK, MED12L, PRKAR2B, RUNX1, ARHGAP6
Ganglion cellsANK2, CADM2, KCNIP4, ROBO2, NRG3, CTNNA2, MDGA2, EPHA6, RALYL, EBF1
Stromal cellsCOL1A1, COL3A1, COL1A2, DCN, COL6A2, COL5A1, COL5A2, IGF2, SPARC, VCAN
Adrenocortical cellsSTAR, CYP17A1, SCARB1, DLK1, DHCR24, FDX1, CYP11A1, LDLR, RBM47, SH3BP5
Lymphatic endothelial cellsCCL21, TFPI, STAB2, PROX1, RELN, EFNA5, IGFBP7, CD36, MMRN1, LYVE1
Myeloid cellsCD74, SRGN, SAMHD1, CST3, AOAH, SLC9A9, CTSB, RBM47, LGMN, FTL
Bronchiolar and alveolar epithelial cellsATP11A, CPM, MECOM, SFTPB, SFTPC, FGFR2, SFTA3, ETV5, ROS1, WIF1
Vascular endothelial cellsLDB2, FLT1, COL4A2, COL4A1, PTPRM, IGFBP7, HSPG2, TCF4, PTPRB, EPAS1
STC2_TLX1 positive cellsHBA2, HBA1, HBG2, HBG1, COL1A1, FBLN5, VCAM1, CXCL13, STC2, TLX1
Satellite cellsCLCN5, OLFML2A, NEB, MATN2, MEGF10, FLNC, PAX7, FGFR4, CDH15, CALCR
AstrocytesNPAS3, PTN, GRID2, LSAMP, GPM6A, SLC1A3, QKI, BAI3, CTNND2, PTPRZ1
SympathoblastsCHGA, CHGB, DPP6, FGF14, RGS5, AGBL4, CACNA2D3, DBH, SLC24A2, SLC18A1
Ureteric bud cellsMECOM, NAALADL2, PKHD1, INADL, PAX8, GATA3, COBLL1, BMPR1B, DCDC2, PAX2
MicrogliaPLXDC2, SPP1, DOCK4, SFMBT2, FRMD4A, SLC9A9, ITPR2, DOCK8, APBB1IP, IPCEF1
Limbic system neuronsPTPRD, NTNG1, RNF220, CNTNAP2, NRXN1, TENM2, RIMS2, RBFOX1, ERC2, MEG3
Inhibitory interneuronsNRXN3, UNC5C, XKR4, NRXN1, NKAIN2, GRID2, CSMD1, ADARB2, ANKS1B, MSRA
Chromaffin cellsRBFOX1, RGS5, STMN2, CACNA2D3, CHGB, KCNQ5, ALCAM, BMPR1B, CHGA, DBH
OligodendrocytesLSAMP, CSMD1, LHFPL3, KCND2, PCDH15, CADM2, PTPRZ1, LRRC4C, OPCML, LRP1B
Endocardial cellsCOL3A1, POSTN, VIM, CDH11, HSPG2, EMCN, FN1, CALCRL, ENG, HMCN1
Photoreceptor cellsCADM2, MARCH1, SYT1, EYS, RORB, FSTL5, GALNT13, MPPED2, CADPS, ZNF385B
ErythroblastsHBG2, HBA1, HBA2, HBG1, SLC25A37, ANK1, TFRC, CD36, EPB41, SPTA1
ENS gliaSLC35F1, ZNF536, GFRA1, CDH19, PLP1, PRIMA1, COL20A1, SOX10, MPZ, INSC
Lymphoid cellsPTPRC, ARHGAP15, B2M, PABPC1, SKAP1, LCP1, HLA-B, FAM65B, ETS1, CD247
Skeletal muscle cellsTTN, MYH3, NEB, MYLPF, TPM2, MYL1, ACTC1, ACTA1, TNNC2, TNNT3
Mesothelial cellsAP000705.7, C3, SULF1, ALDH1A2, HHIP, MSLN, LINC00842, TFPI2, PTPRQ, SBSPON
SLC24A4_PEX5L positive cellsCNTNAP2, FSTL5, GRM7, LRRTM4, LUZP2, GRM3, CSMD3, NRXN3, SLC24A4, PEX5L
Excitatory neuronsRBFOX1, PTPRD, ROBO2, LRRC7, NRXN1, DLGAP1, GPM6A, NKAIN2, SOX5, TMEM108
Retinal progenitors and Muller gliaRORB, LGR4, SORCS1, GALNT13, CLVS1, CRB1, ILDR2, FAM184B, ADAMTS18, RP11-89K21.1
SKOR2_NPSR1 positive cellsDAB1, GRID2, RORA, BAI3, FOXP2, AUTS2, DMD, NRG1, SKOR2, NPSR1
HepatoblastsALB, AFP, APOA1, APOA2, SERPINA1, APOB, HBA1, AHSG, IGF2, HBG2
ThymocytesLEF1, BCL11B, CALN1, TFDP2, ARHGAP15, THEMIS, SATB1, IKZF2, RUNX1, TCF7
Purkinje neuronsDAB1, GRID2, RORA, AUTS2, BAI3, NRG1, EBF1, GRIK1, FOXP2, LPHN2
Syncytiotrophoblasts and villous cytotrophoblastsTENM3, FBN2, ARL15, EGFR, KANK1, ZFAT, SVEP1, RHOBTB1, RP11-30J20.1, MBNL3
Mesangial cellsGPC3, KIAA1217, PALLD, MEIS2, MEIS1, FLRT2, TNC, NR2F2, KIF26B, CCBE1
Smooth muscle cellsCOL4A2, COL3A1, COL1A1, CALD1, NOTCH3, COL6A3, BGN, RGS5, PDGFRB, ITGA1
Intestinal epithelial cellsPCSK5, APOA1, C10orf112, RAB11FIP1, LGALS3, ARID3A, THRB, CPS1, MYH14, HNF4A
Granule neuronsERBB4, GRIK2, RELN, NRG1, KCND2, CNTN5, NRXN1, SYT1, ROBO2, NELL2
Horizontal cellsNRXN3, RORB, CNTN4, ONECUT1, TNR, MEGF10, MEGF11, ONECUT2, CACNG3, TFAP2B
Inhibitory neuronsNRXN3, CCSER1, CTNNA2, RBFOX1, LRRC7, MYT1L, GRIN2B, GRM5, RP11-85M11.2, MIR137HG
Schwann cellsMPZ, OLFML2A, PLP1, CDH19, SOX10, FOXD3, S100B, INSC, ABCA8, NGFR
Islet endocrine cellsCHGA, PCSK1N, GNAS, ERO1LB, CPE, INS, CADPS, TTR, MEIS2, MAFB
Amacrine cellsNRXN3, MEIS2, CADM2, ZNF385D, RORB, DCC, SYT1, DSCAM, MIR181A1HG, RP11-689K5.3
Unipolar brush cellsERBB4, NRXN1, LRP1B, NLGN1, LPHN3, CCSER1, PCDH9, UNC5C, STXBP5L, GRIA2
MUC13_DMBT1 positive cellsDMBT1, CEA, KRT20, MUC13, FER1L6, PHGR1, HNF4G, ABCC3, HNF4A, CDH17
Acinar cellsCEL, SPINK1, CPA1, CTRB2, CLPS, SYCN, CPA2, GP2, CTRB1, DLK1
Metanephric cellsDACH1, PAX2, EYA1, HMGA2, GPC3, TRABD2B, ITGA8, PTPN14, WT1, BMPER
Ductal cellsIGF2, SLC4A4, DLK1, ATP1B1, CFTR, FXYD2, JUN, CLU, SPINK1, H3F3B
Retinal pigment cellsTRPM1, TYR, COL8A1, SLC38A11, LINC00276, BEST1, RP11-690J15.1, RPE65, TYRP1, PMEL
CardiomyocytesTTN, MYL7, TNNT2, TPM1, ACTC1, SLC8A1, TNNC1, MYL4, MYH7, TNNI1
Squamous epithelial cellsKRT19, KRT13, RAB11FIP1, ANXA1, S100A6, DSP, ELF3, PITX1, AQP3, KRT5
Goblet cellsCLDN18, SPINK1, RAB11FIP1, AGR2, MUC6, LYZ, ELF3, GPRC5A, PPARG, PIK3C2G
Extravillous trophoblastsFN1, FLT1, ISM2, NOTUM, PAPPA2, PRG2, ADAM12, FSTL3, QSOX1, SERPINE2
ENS neuronsKCNQ5, EML5, ELAVL4, PHOX2B, MIR137HG, RP11-348J24.2, CNGB1, PRPH, FAM163A, NOS1
Visceral neuronsPRPH, SLC5A7, SLC18A3, PIRT, SST, RP11-466P24.7, CHRNA3, GAL, RGS4, PHOX2B
Ciliated epithelial cellsCDHR3, DNAH12, CAPS, TPPP3, LRRIQ1, C4orf22, STK33, DNAH9, AGBL4, RP11-56A10.1
Epicardial fat cellsC3, PRG4, CCDC80, SULF1, ITLN1, RP11-572C15.6, MSLN, CFH, AP000705.7, PLA2G2A
Parietal and chief cellsESRRG, IGFBP5, FGD4, ATP4B, ATP4A, CLDN18, GIF, ARHGEF28, CLIC6, IGFBP2
Stellate cellsCOL25A1, IGFBP3, ALB, NR1H4, HHIP, CCBE1, HGF, COLEC11, COLEC10, PTH1R
IGFBP1_DKK1 positive cellsLUM, IGFBP1, CD248, SCARA5, DKK1, APOD, GAS1, CHRDL1, SERPINE1, CFD
Bipolar cellsGRIK1, FSTL5, ZNF385B, ZNF804B, CA10, ZPBP, FAM19A4, VSX2, TRPC7, SLC1A7
Neuroendocrine cellsGRP, SEC11C, ASCL1, GHRL, TPH1, HEPACAM2, TFF3, MS4A8, LINC00261, DDC
PAEP_MECOM positive cellsPAEP, AC073218.2, C1orf186, CP, MUC16, RP11-98L5.2, RP11-510D19.1, DEFB1, AC104654.1, MECOM
Corneal and conjunctival epithelial cellsS100A9, LYPD2, LCN2, MUC4, SLPI, KRT4, CP, MUC16, CEACAM6, MUC15
Hematopoietic stem cellsMPO, ALB, RNF220, ITGA4, RP5-964N17.1, RUNX1, ANGPT1, ARHGAP15, IQGAP2, GPR141
CSH1_CSH2 positive cellsCGB, MAGEA10, CGA, INSL4, PAGE4, KISS1, XAGE3, PSG9, CSH1, CSH2
Lens fibre cellsCRYBB1, CRYAA, CRYBB2, CRYBA4, CRYBA1, CRYGC, BFSP1, LIM2, MIP, BFSP2
CCL19_CCL21 positive cellsCCL19, FDCSP, CCL21, PTGDS, C1S, TNFSF11, CXCL13, CXCL12, PRRX1, SLC22A3
Trophoblast giant cellsCSH1, PAPPA, ADAM12, CYP19A1, TFPI2, CSH2, CGA, PSG1, KISS1, FBLN1
SLC26A4_PAEP positive cellsSLC26A4, HSD3B2, RP11-328J2.1, LL0XNC01-16G2.1, BPIFB1, IL1A, MAP3K15, LINC00086, ASB4, PAEP
AFP_ALB positive cellsFGB, AHSG, VTN, KNG1, ITIH2, APOA2, APOC3, FGG, AFP, ALB
Thymic epithelial cellsRP11-114G22.1, PRSS16, TBATA, FAM163A, AC005042.5, FOXN1, PAX1, MIR205HG, LY75, NEURL2
PDE11A_FAM19A2 positive cellsADAMTS18, MEGF10, PDE11A, POU6F2, PTPRR, CHAT, RP11-689K5.3, KCNAB1, RELN, FAM19A2
Antigen presenting cellsRAG1, CCL19, HLA-DRA, CD74, CLNK, HLA-DRB1, HLA-DPB1, BIRC3, WDFY4, CIITA
SATB2_LRRC7 positive cellsFOXG1, NEUROD2, CDK5R1, SATB2, RBFOX1, GRIN2B, NKAIN2, FABP7, ARPP21, LRRC7
ELF3_AGBL2 positive cellsPLN, MYL3, MYL2, MYL7, MYH7, TNNC1, MB, TNNI1, ELF3, AGBL2
CLC_IL5RA positive cellsCLC, MS4A3, IL5RA, MYL3, HAND1, PLN, HSPB7, TNNT2, MYL7, MYH7
PDE1C_ACSM3 positive cellsFOXI1, TFCP2L1, HEPACAM2, STAC2, ST14, CLNK, ATP6V0D2, BMPR1B, PDE1C, ACSM3